4. CHANGELOG

  • 1.2.4

    Remove ‘deprecated’ for IPC v1

  • 1.2.3

    Add IPC2 pKa values (thanks Lukasz Kozlowski, see https://doi.org/10.1093/nar/gkab295). Add RPG’s publication on documentation

  • 1.2.2

    Correct a major bug arising when a new enzyme is define with at least 3 amino acids while the first one being the cleaving site

  • 1.2.1

    Add functional tests

  • 1.2.0

    Input files can be gzipped

    Input file can be processed in parallel (-c options for the number of processes to use)

    Remove Python 3.5 compatibility

  • 1.1.0

    Modify input. Now, option -i only takes files. Use option -s to input sequence

  • 1.0.9

    Correct a bug of random dict in the creation of new enzyme

    Modifying auto repr of a rule and argument name

    Fixing typo

  • 1.0.8

    Adding doc for -p option

    Fixing typo

  • 1.0.7

    Adding choice for pKa values (option -p)

    Fixing alphabetic order for enzymes

  • 1.0.6

    No default output file, only stdout

    Fixing -e and -m behavior

  • 1.0.5

    Fix version date inside RPG

  • 1.0.4

    Fix version number inside RPG

  • 1.0.3

    Support of Python 3.7

    Does not support Python 3.4

  • 1.0.2

    Correct minor but funny typo

  • 1.0.1

    Minor change in enzymes definition in user guide

  • 1.0.0

    Correct a bug when to rules were applying at the same time

    Update user-guide

    Beta to stable

  • 0.7.0

    Add the last 7 enzymes

    Correct block-code in user-guide

  • 0.6.1

    Add 7 enzymes

    Correct some typo

  • 0.6.0

    Finish docs

    Minor change in user-define enzymes

    Alpha to Beta version

  • 0.5.4

    Bugfix: protect new enzyme name when a new enzyme is directly inputted

  • 0.5.3

    Writing Doc

  • 0.5.2

    Incorporating tests, rtfd and Gitlab